Irresistible Carrot Cheesecake Cupcakes

Featured in Let's Bake Something Wonderful.

These cupcakes mix carrot cake full of pineapple, a cheesecake center, and a caramel-topped cream cheese frosting to bring together two favorite desserts in one bite.
Hannah Author
Updated on Fri, 07 Mar 2025 18:29:51 GMT
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These carrot cheesecake cupcakes have become my go-to special occasion dessert. The tender carrot cake envelops a decadent cheesecake center, creating a remarkable combination that transforms an ordinary cupcake into something unforgettable. Perfect for gatherings yet simple enough for weekend baking.

The aroma of these cupcakes baking never fails to draw people to the kitchen. The blend of warm spices and sweet carrots creates an irresistible scent that promises something special. One bite reveals the creamy surprise center that makes these treats truly memorable.

Essential Ingredients

  • Garden-fresh carrots: Finely grated for ideal moisture and texture
  • Crushed pineapple: Adds natural sweetness and incredible moisture
  • Full-fat cream cheese: Creates the richest filling and frosting
  • Baking spices: Carefully balanced cinnamon, nutmeg, ginger, and allspice
  • Rich caramel: The finishing touch that ties everything together
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Preparation Method

Carrot Technique
Use the fine grater side for perfectly textured carrots. Pack the measuring cup firmly to ensure proper moisture content in the finished cupcakes. Avoid pre-shredded carrots which can be too dry.
Pineapple Process
Drain crushed pineapple in a mesh strainer, pressing gently to remove excess liquid while retaining some moisture. Reserve the juice for other uses or to moisten cupcakes if needed.
Mixing Strategy
Combine ingredients with minimal mixing to maintain tenderness. Use a spatula to fold wet and dry components together just until incorporated. Some small lumps are acceptable.
Filling Technique
Create wells in batter using a spoon back, then add softened cream cheese mixture. Swirl gently with a toothpick for marbled effect without fully combining.
Baking Guidelines
Monitor closely starting at 18 minutes. Cupcakes are done when a toothpick in the cake portion shows moist crumbs. Centers should appear slightly underset.
Frosting Application
Ensure ingredients reach room temperature for smooth results. Beat cream cheese and butter thoroughly before adding sugar. Use 1M tip for piping, leaving space for caramel topping.

The combination of spiced carrot cake, rich cheesecake filling, and caramel drizzle creates an irresistible dessert that appeals to both cake enthusiasts and those who typically prefer other sweets. The contrast of textures and flavors makes each bite memorable.

Serving Suggestions

Accompany these cupcakes with freshly brewed coffee or tea. For special occasions, serve alongside dessert wines like Sauternes. They make an excellent finale to autumn meals or holiday celebrations. A glass of cold milk provides the perfect complement to the rich flavors.

Creative Variations

Mix in chopped nuts for added crunch and flavor. Substitute chocolate drizzle for caramel topping. Incorporate shredded coconut into the batter for tropical flair. Adding citrus zest to both cake and frosting creates bright spring flavors.

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These cupcakes consistently impress at gatherings from casual family events to formal celebrations. The surprise cheesecake center elevates them above traditional carrot cake, creating a unique dessert that guests remember long after the last crumb disappears. The combination of familiar flavors in an unexpected format makes these treats truly special.

Frequently Asked Questions

→ How early can I make these cupcakes before serving?
You can bake them 1-2 days ahead, but store them in a sealed container in the fridge. For the best result, wait to add the caramel topping until you're ready to eat them so the frosting stays fresh.
→ Do these need to be kept in the fridge?
Yep! Since they have cheesecake filling and a cream cheese topping, it's best to store them chilled. Keep them in a tightly sealed container in the fridge for up to 5 days.
→ Can I freeze the cupcakes, and how?
Totally! You can freeze them without the frosting for up to two months. Let them thaw in the fridge overnight, then frost before eating. You can freeze the frosted ones too, but the texture of the topping might change a little.
→ Is there a substitute for the crushed pineapple?
Sure! Swap it with grated apple or applesauce for that extra moisture. It’ll taste a bit different, but the cupcakes will still turn out soft and delicious.
→ Why does everything have to be at room temperature?
When your ingredients are room temperature, they mix together better for a smoother batter. Cold butter or cream cheese can make your batter or frosting lumpy, messing up the final result.

Carrot Creamy Cupcakes

Fluffy carrot cake with a cheesecake twist, finished with cream cheese frosting and sticky caramel - a fun spin on the classic dessert!

Prep Time
20 Minutes
Cook Time
22 Minutes
Total Time
42 Minutes

Category: Sweet Kitchen

Difficulty: Intermediate

Cuisine: American

Yield: 12 Servings (12 cupcakes)

Dietary: Vegetarian

Ingredients

→ Carrot Cupcakes

01 1/2 cup oil for cooking or baking
02 1/2 cup white sugar
03 1/2 cup packed light brown sugar
04 3/4 cup firmly packed grated carrots
05 1/4 cup crushed pineapple without the juice
06 2 large eggs, room temp
07 2 teaspoons of vanilla flavoring
08 1 cup plus 3 extra tablespoons of all-purpose flour, leveled off
09 1 teaspoon of baking soda
10 1 1/2 teaspoons of ground cinnamon spice
11 1 teaspoon allspice powder
12 1/2 teaspoon of ordinary salt
13 1/4 teaspoon ground nutmeg
14 1/4 teaspoon powdered ginger

→ Cheesecake Filling

15 6 ounces of softened cream cheese
16 3 tablespoons white sugar
17 1/2 teaspoon vanilla flavoring

→ Cream Cheese Frosting

18 Half a cup of unsalted butter at room temp
19 6 ounces of softened cream cheese
20 1 1/2 cups powdered sugar for sweetness
21 1/2 teaspoon of vanilla flavoring

→ Topping

22 Caramel topping from the store (Smuckers is great)

Instructions

Step 01

Turn your oven on to 350°F (175°C). Use cupcake liners to line an average-sized muffin tin.

Step 02

Grab a big bowl. In it, mix together the oil, both sugars, the grated carrots, drained pineapple, eggs, and vanilla. Stir everything together so it’s all blended.

Step 03

Take a separate bowl and sift in the flour, baking soda, cinnamon, allspice, salt, nutmeg, and ginger. Carefully add the dry stuff to the wet, gently stirring until it’s just mixed—don’t go overboard.

Step 04

Using a medium bowl, whip up the cream cheese, sugar, and vanilla until smooth and creamy in texture.

Step 05

Spoon enough of the carrot cake batter to fill each cupcake liner about two-thirds of the way up. Drop a tablespoon of the cream cheese mix into the center of every cupcake, then use a toothpick or a knife to lightly swirl the two together.

Step 06

Bake the cupcakes for 18–22 minutes. You’ll know they're done if a toothpick poked into the cake part comes out without any wet batter. Let them cool in the tin for 5 minutes, then place them on a cooling rack.

Step 07

Using a stand mixer with the paddle attachment, or a hand mixer, beat the butter and cream cheese on medium for around 2–3 minutes until smooth. Add in the powdered sugar and vanilla on low, then turn it up to medium-high and beat it for another couple of minutes to make it fluffy.

Step 08

Scoop the frosting into a piping bag with a 1M star tip. Pipe the frosting in a circle on each cupcake, leaving a little dip in the middle. Add caramel sauce to the center.

Step 09

Eat right away or store in the fridge until you're ready. For full flavor, take the cupcakes out about 15–20 minutes before serving to warm up a bit.

Notes

  1. Bring everything to room temperature for a nice, smooth batter and frosting.
  2. Like nuts in your cake? Toss some chopped pecans or walnuts into the mix.
  3. Drain the pineapple really well so your batter doesn’t get soggy.
  4. These cupcakes are like a match made in heaven—carrot cake and cheesecake together!

Tools You'll Need

  • A regular muffin or cupcake tin
  • Cupcake papers
  • A mixer, stand or hand-held
  • Bowls for mixing
  • Measuring cups and spoons
  • A sifter or a fine mesh strainer
  • A piping bag with a 1M star tip
  • A toothpick or a small knife to swirl

Allergy Information

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Includes wheat (gluten)
  • Contains dairy products (butter, cream cheese)
  • Has eggs

Nutrition Facts (Per Serving)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 380
  • Total Fat: 23 g
  • Total Carbohydrate: 42 g
  • Protein: 4 g